mirror of
https://gitlab.com/pholy/OSCAR-code.git
synced 2025-04-05 10:40:42 +00:00
Fix PRS1 Waveform duration error
This commit is contained in:
Mark Watkins
parent
7cebae26d1
commit
3666391553
@ -191,9 +191,6 @@ QString gLineChart::getMetaString(ChannelID code, qint64 xpos)
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}
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}
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QDateTime dt=QDateTime::fromMSecsSinceEpoch(xpos);
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text = dt.toString("MMM dd - HH:mm:ss:zzz")+" "+text;
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lastcode = code;
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lasttime = xpos;
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lasttext = text;
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@ -276,14 +273,26 @@ void gLineChart::paint(QPainter &painter, gGraph &w, const QRegion ®ion)
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if (p_profile->appearance->lineCursorMode()) {
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qint64 time = w.currentTime();
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QDateTime dt=QDateTime::fromMSecsSinceEpoch(time);
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QString text = dt.toString("MMM dd - HH:mm:ss:zzz");
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if ((time > minx) && (time < maxx)) {
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double xpos = (time - minx) * xmult;
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painter.setPen(QPen(QBrush(QColor(0,255,0,255)),1));
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painter.drawLine(left+xpos, top-w.marginTop()-3, left+xpos, top+height+w.bottom-1);
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}
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QString text = getMetaString(m_codes[0], time);
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//QString text = getMetaString(m_codes[0], time);
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for (int i=0; i<m_codes.size(); ++i) {
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ChannelID code = m_codes[i];
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if (m_day->channelHasData(code)) {
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EventDataType val = m_day->lookupValue(code, time);
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text += " "+QString("%1: %2 %3").arg(schema::channel[code].label()).arg(val).arg(schema::channel[code].units());
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}
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}
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int wid, h;
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GetTextExtent(text, wid, h);
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@ -270,6 +270,8 @@ EventDataType *FlowParser::applyFilters(EventDataType *data, int samples)
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return out;
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}
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// Opens the flow rate EventList, applies the input filter chain, and calculates peaks
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void FlowParser::openFlow(Session *session, EventList *flow)
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{
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if (!flow) {
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@ -286,8 +288,7 @@ void FlowParser::openFlow(Session *session, EventList *flow)
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// Make sure we won't overflow internal buffers
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if (m_samples > max_filter_buf_size) {
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qDebug() <<
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"Error: Sample size exceeds max_filter_buf_size in FlowParser::openFlow().. Capping!!!";
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qDebug() << "Error: Sample size exceeds max_filter_buf_size in FlowParser::openFlow().. Capping!!!";
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m_samples = max_filter_buf_size;
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}
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@ -304,6 +305,7 @@ void FlowParser::openFlow(Session *session, EventList *flow)
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// Apply the rest of the filters chain
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buf = applyFilters(m_filtered, m_samples);
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// Scan for and create an index of each breath
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calcPeaks(m_filtered, m_samples);
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}
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@ -330,8 +332,11 @@ void FlowParser::calcPeaks(EventDataType *input, int samples)
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// Estimate storage space needed using typical average breaths per minute.
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m_minutes = double(m_flow->last() - m_flow->first()) / 60000.0;
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const double avgbpm = 20;
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const double avgbpm = 20; // average breaths per minute of a standard human
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int guestimate = m_minutes * avgbpm;
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// reserve some memory
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breaths.reserve(guestimate);
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// Prime min & max, and see which side of the zero line we are starting from.
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@ -340,13 +345,13 @@ void FlowParser::calcPeaks(EventDataType *input, int samples)
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lastc = c;
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m_startsUpper = (c >= zeroline);
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qint32 start = 0, middle = 0; //,end=0;
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qint32 start = 0, middle = 0;
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int sps = 1000 / m_rate;
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int len = 0, lastk = 0; //lastlen=0
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int len = 0, lastk = 0;
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qint64 sttime = time; //, ettime=time;
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qint64 sttime = time;
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// For each samples, find the peak upper and lower breath components
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for (int k = 0; k < samples; k++) {
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@ -362,13 +367,12 @@ void FlowParser::calcPeaks(EventDataType *input, int samples)
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if ((max > 3) && ((max - min) > 8) && (len > sps) && (middle > start)) {
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// peak detection may not be needed..
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breaths.push_back(BreathPeak(min, max, start, middle, k)); //, peakmin, peakmax));
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breaths.push_back(BreathPeak(min, max, start, middle, k));
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// Set max for start of the upper breath cycle
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max = c;
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peakmax = time;
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// Starting point of next breath cycle
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start = k;
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sttime = time;
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@ -500,7 +504,7 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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if (calcMv) {
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MV = m_session->AddEventList(CPAP_MinuteVent, EVL_Event);
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MV->setGain(0.125);
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MV->setGain(0.125); // gain set to 1/8th
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}
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EventDataType sps = (1000.0 / m_rate); // Samples Per Second
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@ -509,19 +513,15 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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qint32 timeval = 0; // Time relative to start
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BreathPeak * bpstr = breaths.data();
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BreathPeak * bpend = bpstr + nm;
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// For each breath...
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for (BreathPeak * bp = bpstr; bp != bpend; ++bp) {
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bs = bp->start;
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bm = bp->middle;
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be = bp->end;
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// for (idx = 0; idx < nm; idx++) {
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// bs = breaths[idx].start;
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// bm = breaths[idx].middle;
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// be = breaths[idx].end;
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// Calculate start, middle and end time of this breath
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st = start + bs * m_rate;
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mt = start + bm * m_rate;
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@ -530,15 +530,22 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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et = start + timeval;
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/////////////////////////////////////////////////////////////////////
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// Calculate Inspiratory Time (Ti) for this breath
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/////////////////////////////////////////////////////////////////////
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if (calcTi) {
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// Ti is simply the time between the start of a breath and it's midpoint
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// Note the 50.0 is the gain value, to give it better resolution
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// (and mt and st are in milliseconds)
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ti = ((mt - st) / 1000.0) * 50.0;
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ti1 = (lastti2 + lastti + ti) / 3.0;
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Ti->AddEvent(mt, ti1);
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// Average for a little smoothing
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ti1 = (lastti2 + lastti + ti * 2) / 4.0;
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Ti->AddEvent(mt, ti1); // Add the event
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// Track the last two values to use for averaging
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lastti2 = lastti;
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lastti = ti;
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}
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@ -547,9 +554,11 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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// Calculate Expiratory Time (Te) for this breath
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/////////////////////////////////////////////////////////////////////
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if (calcTe) {
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// Te is simply the time between the second half of the breath
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te = ((et - mt) / 1000.0) * 50.0;
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// Average last three values..
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te1 = (lastte2 + lastte + te) / 3.0;
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te1 = (lastte2 + lastte + te * 2 ) / 4.0;
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Te->AddEvent(mt, te1);
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lastte2 = lastte;
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@ -569,13 +578,29 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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val2 += c;
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//val2+=c*c; // for RMS
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}
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tv = val2;
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bool usebothhalves = false;
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if (usebothhalves) {
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for (int j = bm; j < be; j++) {
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// convert flow to ml/s to L/min and divide by samples per second
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c = double(qAbs(m_filtered[j])) * 1000.0 / 60.0 / sps;
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val1 += c;
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//val1 += c*c; // for RMS
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}
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tv = (qAbs(val2) + qAbs(val1)) / 2;
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}
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// Add the other half here and average might make it more accurate
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// But last time I tried it was pretty messy
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// Perhaps needs a bit of history averaging..
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// calculate root mean square
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//double n=bm-bs;
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//double q=(1/n)*val2;
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//double x=sqrt(q)*2;
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//val2=x;
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tv = val2;
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if (tv < mintv) { mintv = tv; }
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@ -600,17 +625,12 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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len = et - stmin;
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rr = 0;
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len2 = 0;
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//if ( len >= minute) {
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//et2=et;
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// Step back through last minute and count breaths
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BreathPeak *bpstr1 = bpstr-1;
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for (BreathPeak *p = bp; p != bpstr1; --p) {
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st2 = start + double(p->start) * m_rate;
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et2 = start + double(p->end) * m_rate;
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// for (int i = idx; i >= 0; i--) {
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// st2 = start + double(breaths[i].start) * m_rate;
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// et2 = start + double(breaths[i].end) * m_rate;
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if (et2 < stmin) {
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break;
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@ -652,13 +672,13 @@ void FlowParser::calc(bool calcResp, bool calcTv, bool calcTi, bool calcTe, bool
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*rr_dptr++ = rr * 5.0;
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rr_count++;
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//rr->AddEvent(et,br * 50.0);
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//}
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}
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if (calcMv && calcResp && calcTv) {
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// Minute Ventilation is tidal volume times respiratory rate
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mv = (tv / 1000.0) * rr;
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// The 8.0 is the gain of the MV EventList to boost resolution
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MV->AddEvent(et, mv * 8.0);
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}
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}
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@ -1423,6 +1423,7 @@ bool PRS1SessionData::ParseWaveforms()
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continue;
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}
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quint64 ti = quint64(waveform->timestamp) * 1000L;
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qint64 dur = qint64(waveform->duration) * 1000L;
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if (num > 1) {
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// Process interleaved samples
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@ -1439,19 +1440,19 @@ bool PRS1SessionData::ParseWaveforms()
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} while (pos < size);
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if (data[0].size() > 0) {
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EventList * flow = session->AddEventList(CPAP_FlowRate, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, (waveform->duration * 1000.0) / data[0].size());
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flow->AddWaveform(ti, (char *)data[0].data(), data[0].size(), waveform->duration);
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EventList * flow = session->AddEventList(CPAP_FlowRate, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, dur / data[0].size());
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flow->AddWaveform(ti, (char *)data[0].data(), data[0].size(), dur);
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}
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if (data[1].size() > 0) {
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EventList * pres = session->AddEventList(CPAP_MaskPressureHi, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, (waveform->duration * 1000.0) / data[1].size());
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pres->AddWaveform(ti, (unsigned char *)data[1].data(), data[1].size(), waveform->duration);
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EventList * pres = session->AddEventList(CPAP_MaskPressureHi, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, dur / data[1].size());
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pres->AddWaveform(ti, (unsigned char *)data[1].data(), data[1].size(), dur);
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}
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} else {
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// Non interleaved, so can process it much faster
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EventList * flow = session->AddEventList(CPAP_FlowRate, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, (waveform->duration * 1000.0) / waveform->m_data.size());
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flow->AddWaveform(ti, (char *)waveform->m_data.data(), waveform->m_data.size(), waveform->duration);
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EventList * flow = session->AddEventList(CPAP_FlowRate, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, dur / waveform->m_data.size());
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flow->AddWaveform(ti, (char *)waveform->m_data.data(), waveform->m_data.size(), dur);
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}
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}
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return true;
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@ -960,27 +960,32 @@ EventDataType Session::SearchValue(ChannelID code, qint64 time)
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quint32 *tptr;
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int cnt;
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if (code == CPAP_FlowRate) {
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int i=5;
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}
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if (it != eventlist.end()) {
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int el_size=it.value().size();
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for (int i = 0; i < el_size; i++) {
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EventList *el = it.value()[i];
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if ((time < el->first()) || (time > el->last())) continue;
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if ((time >= el->first())
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&& (time < el->last())) {
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cnt = el->count();
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cnt = el->count();
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if (el->type() == EVL_Waveform) {
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qint64 tt = time - el->first();
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qint64 i = tt / el->rate();
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return el->data(i);
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} else {
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start = el->first();
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tptr = el->rawTime();
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if (el->type() == EVL_Waveform) {
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qint64 tt = time - el->first();
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qint64 i = tt / el->rate();
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return el->data(i);
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} else {
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start = el->first();
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tptr = el->rawTime();
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for (int j = 0; j < cnt-1; j++) {
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tptr++;
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tt = start + *tptr;
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if (tt > time) {
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return el->data(j);
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for (int j = 0; j < cnt-1; j++) {
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tptr++;
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tt = start + *tptr;
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if (tt > time) {
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return el->data(j);
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}
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}
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}
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}
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@ -51,7 +51,7 @@
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<item>
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<widget class="QTabWidget" name="tabWidget">
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<property name="currentIndex">
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<number>1</number>
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<number>0</number>
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</property>
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<widget class="QWidget" name="importTab">
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<attribute name="title">
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@ -712,144 +712,7 @@ p, li { white-space: pre-wrap; }
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</item>
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<item>
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<layout class="QGridLayout" name="gridLayout_11">
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<item row="3" column="0" colspan="2">
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<widget class="QGroupBox" name="complianceGroupbox">
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<property name="toolTip">
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<string>Don't show any compliance information</string>
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</property>
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<property name="title">
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<string>Show Compliance</string>
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</property>
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<property name="checkable">
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<bool>true</bool>
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</property>
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<layout class="QGridLayout" name="gridLayout_7">
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<property name="leftMargin">
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<number>4</number>
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</property>
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<property name="topMargin">
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<number>4</number>
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</property>
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<property name="rightMargin">
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<number>4</number>
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</property>
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<property name="bottomMargin">
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<number>4</number>
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</property>
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<property name="spacing">
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<number>4</number>
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</property>
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<item row="0" column="1">
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<widget class="QDoubleSpinBox" name="complianceHours">
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<property name="sizePolicy">
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<sizepolicy hsizetype="Fixed" vsizetype="Fixed">
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<horstretch>0</horstretch>
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<verstretch>0</verstretch>
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</sizepolicy>
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</property>
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<property name="toolTip">
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<string>Regard days with under this usage as "incompliant". 4 hours is usually considered compliant.</string>
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</property>
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<property name="suffix">
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<string> hours</string>
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</property>
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<property name="decimals">
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<number>1</number>
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</property>
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<property name="maximum">
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<double>8.000000000000000</double>
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</property>
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<property name="value">
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<double>4.000000000000000</double>
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</property>
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</widget>
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</item>
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<item row="0" column="0">
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<widget class="QLabel" name="label_39">
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<property name="sizePolicy">
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<sizepolicy hsizetype="Fixed" vsizetype="Preferred">
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<horstretch>0</horstretch>
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<verstretch>0</verstretch>
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</sizepolicy>
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</property>
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<property name="text">
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<string>as over</string>
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</property>
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</widget>
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</item>
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<item row="0" column="2">
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<widget class="QLabel" name="label_40">
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<property name="text">
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<string>of usage per night</string>
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</property>
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</widget>
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</item>
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</layout>
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</widget>
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</item>
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<item row="0" column="0">
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<widget class="QLabel" name="label_44">
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<property name="font">
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<font>
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<weight>75</weight>
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<bold>true</bold>
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</font>
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</property>
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<property name="text">
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<string>CPAP Clock Drift</string>
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</property>
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</widget>
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</item>
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<item row="2" column="0" colspan="2">
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<widget class="QCheckBox" name="AddRERAtoAHI">
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<property name="font">
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<font>
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<weight>75</weight>
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<bold>true</bold>
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</font>
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</property>
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<property name="toolTip">
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<string>Shows Respiratory Disturbance Index instead of Apnea/Hypopnea Index (RDI=AHI + RERA)</string>
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||||
</property>
|
||||
<property name="text">
|
||||
<string>Use RDI instead of AHI (PRS1 only)</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="0" column="1">
|
||||
<widget class="QSpinBox" name="clockDrift">
|
||||
<property name="toolTip">
|
||||
<string>Don't touch this unless you know your CPAP clock is out.
|
||||
Try to sync it to your PC's clock (which should be synced to a timeserver)</string>
|
||||
</property>
|
||||
<property name="suffix">
|
||||
<string> seconds</string>
|
||||
</property>
|
||||
<property name="minimum">
|
||||
<number>-7200</number>
|
||||
</property>
|
||||
<property name="maximum">
|
||||
<number>7200</number>
|
||||
</property>
|
||||
<property name="value">
|
||||
<number>0</number>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="6" column="0">
|
||||
<spacer name="verticalSpacer_7">
|
||||
<property name="orientation">
|
||||
<enum>Qt::Vertical</enum>
|
||||
</property>
|
||||
<property name="sizeHint" stdset="0">
|
||||
<size>
|
||||
<width>20</width>
|
||||
<height>40</height>
|
||||
</size>
|
||||
</property>
|
||||
</spacer>
|
||||
</item>
|
||||
<item row="4" column="0" colspan="2">
|
||||
<item row="5" column="0" rowspan="2" colspan="2">
|
||||
<widget class="QGroupBox" name="customEventGroupbox">
|
||||
<property name="toolTip">
|
||||
<string>Enable/disable experimental event flagging enhancements.
|
||||
@ -859,6 +722,9 @@ This option must be enabled before import, otherwise a purge is required.</strin
|
||||
<property name="title">
|
||||
<string>Custom User Event Flagging</string>
|
||||
</property>
|
||||
<property name="flat">
|
||||
<bool>false</bool>
|
||||
</property>
|
||||
<property name="checkable">
|
||||
<bool>true</bool>
|
||||
</property>
|
||||
@ -1036,11 +902,43 @@ p, li { white-space: pre-wrap; }
|
||||
</layout>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="5" column="0" colspan="2">
|
||||
<item row="1" column="0">
|
||||
<widget class="QCheckBox" name="showLeakRedline">
|
||||
<property name="font">
|
||||
<font>
|
||||
<weight>50</weight>
|
||||
<bold>false</bold>
|
||||
</font>
|
||||
</property>
|
||||
<property name="toolTip">
|
||||
<string>Whether to show the leak redline in the leak graph</string>
|
||||
</property>
|
||||
<property name="text">
|
||||
<string>Show Leak Redline</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="1" column="1">
|
||||
<widget class="QDoubleSpinBox" name="leakRedlineSpinbox">
|
||||
<property name="toolTip">
|
||||
<string>User definable threshold considered large leak</string>
|
||||
</property>
|
||||
<property name="suffix">
|
||||
<string> L/min</string>
|
||||
</property>
|
||||
<property name="decimals">
|
||||
<number>1</number>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="7" column="0" colspan="2">
|
||||
<widget class="QGroupBox" name="ahiGraphGroupbox">
|
||||
<property name="title">
|
||||
<string>AHI/Hour Graph Settings</string>
|
||||
</property>
|
||||
<property name="flat">
|
||||
<bool>false</bool>
|
||||
</property>
|
||||
<property name="checkable">
|
||||
<bool>false</bool>
|
||||
</property>
|
||||
@ -1109,32 +1007,143 @@ Defaults to 60 minutes.. Highly recommend it's left at this value.</string>
|
||||
</layout>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="1" column="1">
|
||||
<widget class="QDoubleSpinBox" name="leakRedlineSpinbox">
|
||||
<property name="toolTip">
|
||||
<string>User definable threshold considered large leak</string>
|
||||
<item row="0" column="0">
|
||||
<widget class="QLabel" name="label_44">
|
||||
<property name="font">
|
||||
<font>
|
||||
<weight>50</weight>
|
||||
<bold>false</bold>
|
||||
</font>
|
||||
</property>
|
||||
<property name="suffix">
|
||||
<string> L/min</string>
|
||||
</property>
|
||||
<property name="decimals">
|
||||
<number>1</number>
|
||||
<property name="text">
|
||||
<string>CPAP Clock Drift</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="1" column="0">
|
||||
<widget class="QCheckBox" name="showLeakRedline">
|
||||
<item row="0" column="1">
|
||||
<widget class="QSpinBox" name="clockDrift">
|
||||
<property name="toolTip">
|
||||
<string>Don't touch this unless you know your CPAP clock is out.
|
||||
Try to sync it to your PC's clock (which should be synced to a timeserver)</string>
|
||||
</property>
|
||||
<property name="suffix">
|
||||
<string> seconds</string>
|
||||
</property>
|
||||
<property name="minimum">
|
||||
<number>-7200</number>
|
||||
</property>
|
||||
<property name="maximum">
|
||||
<number>7200</number>
|
||||
</property>
|
||||
<property name="value">
|
||||
<number>0</number>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="8" column="0" colspan="2">
|
||||
<spacer name="verticalSpacer_7">
|
||||
<property name="orientation">
|
||||
<enum>Qt::Vertical</enum>
|
||||
</property>
|
||||
<property name="sizeHint" stdset="0">
|
||||
<size>
|
||||
<width>20</width>
|
||||
<height>40</height>
|
||||
</size>
|
||||
</property>
|
||||
</spacer>
|
||||
</item>
|
||||
<item row="3" column="0" rowspan="2" colspan="2">
|
||||
<widget class="QGroupBox" name="complianceGroupbox">
|
||||
<property name="toolTip">
|
||||
<string>Don't show any compliance information</string>
|
||||
</property>
|
||||
<property name="title">
|
||||
<string>Show Compliance</string>
|
||||
</property>
|
||||
<property name="flat">
|
||||
<bool>false</bool>
|
||||
</property>
|
||||
<property name="checkable">
|
||||
<bool>true</bool>
|
||||
</property>
|
||||
<layout class="QGridLayout" name="gridLayout_7">
|
||||
<property name="leftMargin">
|
||||
<number>4</number>
|
||||
</property>
|
||||
<property name="topMargin">
|
||||
<number>4</number>
|
||||
</property>
|
||||
<property name="rightMargin">
|
||||
<number>4</number>
|
||||
</property>
|
||||
<property name="bottomMargin">
|
||||
<number>4</number>
|
||||
</property>
|
||||
<property name="spacing">
|
||||
<number>4</number>
|
||||
</property>
|
||||
<item row="0" column="1">
|
||||
<widget class="QDoubleSpinBox" name="complianceHours">
|
||||
<property name="sizePolicy">
|
||||
<sizepolicy hsizetype="Fixed" vsizetype="Fixed">
|
||||
<horstretch>0</horstretch>
|
||||
<verstretch>0</verstretch>
|
||||
</sizepolicy>
|
||||
</property>
|
||||
<property name="toolTip">
|
||||
<string>Regard days with under this usage as "incompliant". 4 hours is usually considered compliant.</string>
|
||||
</property>
|
||||
<property name="suffix">
|
||||
<string> hours</string>
|
||||
</property>
|
||||
<property name="decimals">
|
||||
<number>1</number>
|
||||
</property>
|
||||
<property name="maximum">
|
||||
<double>8.000000000000000</double>
|
||||
</property>
|
||||
<property name="value">
|
||||
<double>4.000000000000000</double>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="0" column="0">
|
||||
<widget class="QLabel" name="label_39">
|
||||
<property name="sizePolicy">
|
||||
<sizepolicy hsizetype="Fixed" vsizetype="Preferred">
|
||||
<horstretch>0</horstretch>
|
||||
<verstretch>0</verstretch>
|
||||
</sizepolicy>
|
||||
</property>
|
||||
<property name="text">
|
||||
<string>as over</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="0" column="2">
|
||||
<widget class="QLabel" name="label_40">
|
||||
<property name="text">
|
||||
<string>of usage per night</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
</layout>
|
||||
</widget>
|
||||
</item>
|
||||
<item row="2" column="0" colspan="2">
|
||||
<widget class="QCheckBox" name="AddRERAtoAHI">
|
||||
<property name="font">
|
||||
<font>
|
||||
<weight>75</weight>
|
||||
<bold>true</bold>
|
||||
<weight>50</weight>
|
||||
<bold>false</bold>
|
||||
</font>
|
||||
</property>
|
||||
<property name="toolTip">
|
||||
<string>Whether to show the leak redline in the leak graph</string>
|
||||
<string>Shows Respiratory Disturbance Index instead of Apnea/Hypopnea Index (RDI=AHI + RERA)</string>
|
||||
</property>
|
||||
<property name="text">
|
||||
<string>Show Leak Redline</string>
|
||||
<string>Use RDI instead of AHI (PRS1 only)</string>
|
||||
</property>
|
||||
</widget>
|
||||
</item>
|
||||
|
||||
Loading…
Reference in New Issue
Block a user