mirror of
https://gitlab.com/pholy/OSCAR-code.git
synced 2025-04-05 18:50:44 +00:00
Initial commit of contributed Viatom SpO2 loader.
Diff applied from the following commit by dave madden <dhm@mersenne.com>,
replacing tabs with spaces:
fa38850503
This commit is contained in:
sawinglogz
parent
94e39c2733
commit
66f13f3143
@ -465,6 +465,7 @@ QString STR_TR_EventFlags;
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QString STR_TR_Inclination;
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QString STR_TR_Orientation;
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QString STR_TR_Motion;
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// Machine type names.
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@ -772,6 +773,7 @@ void initializeStrings()
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STR_TR_Inclination = QObject::tr("Inclination");
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STR_TR_Orientation = QObject::tr("Orientation");
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STR_TR_Motion = QObject::tr("Motion");
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STR_TR_Name = QObject::tr("Name");
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STR_TR_DOB = QObject::tr("DOB"); // Date of Birth
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@ -249,6 +249,7 @@ extern QString STR_TR_EventFlags;
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extern QString STR_TR_Inclination;
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extern QString STR_TR_Orientation;
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extern QString STR_TR_Motion;
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// Machine type names.
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extern QString STR_TR_CPAP; // Constant Positive Airway Pressure
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159
oscar/SleepLib/loader_plugins/viatom_loader.cpp
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159
oscar/SleepLib/loader_plugins/viatom_loader.cpp
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@ -0,0 +1,159 @@
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/* SleepLib Viatom Loader Implementation
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*
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* Copyright (c) 2019 The OSCAR Team (written by dave madden <dhm@mersenne.com>)
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*
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* This file is subject to the terms and conditions of the GNU General Public
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* License. See the file COPYING in the main directory of the source code
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* for more details. */
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//********************************************************************************************
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// IMPORTANT!!!
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//********************************************************************************************
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// Please INCREMENT the viatom_data_version in viatom_loader.h when making changes to this loader
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// that change loader behaviour or modify channels.
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//********************************************************************************************
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#include <QDir>
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#include <QTextStream>
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#include "viatom_loader.h"
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#include "SleepLib/machine.h"
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bool
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ViatomLoader::Detect(const QString & path)
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{
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// I don't know under what circumstances this is called...
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qDebug() << "ViatomLoader::Detect(" << path << ")";
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return true;
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}
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int
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ViatomLoader::Open( const QString & dirpath )
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{
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// I don't know under what circumstances this is called...
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qDebug() << "ViatomLoader::Open(" << dirpath << ")";
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return 0;
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}
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int
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ViatomLoader::OpenFile( const QString & filename )
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{
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qDebug() << "ViatomLoader::OpenFile(" << filename << ")";
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QFile file(filename);
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if (!file.open( QFile::ReadOnly )) {
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qDebug() << "Couldn't open Viatom data file" << filename;
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return 0;
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}
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QByteArray data;
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qint64 filesize = file.size();
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data = file.readAll();
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QDataStream in(data);
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in.setByteOrder(QDataStream::LittleEndian);
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quint16 sig;
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quint16 Y;
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quint8 m,d,H,M,S;
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in >> sig >> Y >> m >> d >> H >> M >> S;
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if (sig != 0x0003 ||
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(Y < 2015 || Y > 2040) ||
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(m < 1 || m > 12) ||
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(d < 1 || d > 31) ||
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( H > 23) ||
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( M > 60) ||
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( S > 61)) {
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qDebug( ) << filename << "does not appear to be a Viatom data file";
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return false;
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}
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char dchr[32];
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sprintf( dchr, "%02u/%02u/%04u %02u:%02u:%02u", m, d, Y, H, M, S );
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QDateTime data_timestamp = QDateTime::fromString( QString( dchr ), "MM/dd/yyyy HH:mm:ss" );
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quint64 time_s = data_timestamp.toTime_t( );
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quint64 time_ms = time_s * 1000L;
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SessionID sid = time_s;
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qDebug( ) << filename << "looks like a Viatom file, size" << filesize << "bytes signature" << sig
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<< "start date/time" << data_timestamp << "(" << time_ms << ")";
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in.skipRawData( 41 ); // total 50 byte header, not sure what the rest is.
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MachineInfo info = newInfo( );
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Machine *mach = p_profile->CreateMachine( info );
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Session *sess = mach->SessionExists( sid );
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if (!sess) {
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qDebug( ) << "Session at" << data_timestamp << "not found...create new session" << sid;
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sess = new Session( mach, sid );
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sess->really_set_first( time_ms );
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} else {
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qDebug( ) << "Session" << sid << "found...add data to it";
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}
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EventList *ev_hr = sess->AddEventList( OXI_Pulse, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, 2000.0 );
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EventList *ev_o2 = sess->AddEventList( OXI_SPO2, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, 2000.0 );
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EventList *ev_mv = sess->AddEventList( POS_Motion, EVL_Waveform, 1.0, 0.0, 0.0, 0.0, 2000.0 );
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unsigned char o2, hr, x, motion;
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unsigned char o2_ = 99, hr_ = 60, motion_ = 0;
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unsigned n_rec = 0;
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quint64 step = 2000; // records @ 2000ms (2 sec)
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// Read all Pulse, SPO2 and Motion data
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do {
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in >> o2 >> hr >> x >> motion >> x;
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if (o2 < 50 || o2 > 100) o2 = o2_;
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if (hr < 20 || hr > 200) hr = hr_;
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if (motion > 200) motion = motion_;
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sess->set_last( time_ms );
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ev_hr->AddEvent( time_ms, hr );
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ev_o2->AddEvent( time_ms, o2 );
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ev_mv->AddEvent( time_ms, motion );
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o2_ = o2;
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hr_ = hr;
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motion_ = motion;
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time_ms += step;
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n_rec += 1;
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} while (!in.atEnd());
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qDebug( ) << "Read Viatom data from" << data_timestamp << "to" << (QDateTime::fromSecsSinceEpoch( time_ms / 1000L ))
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<< n_rec << "records"
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<< ev_mv->Min( ) << "<=Motion<=" << ev_mv->Max( );
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sess->setMin( OXI_Pulse, ev_hr->Min( ) );
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sess->setMax( OXI_Pulse, ev_hr->Max( ) );
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sess->setMin( OXI_SPO2, ev_o2->Min( ) );
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sess->setMax( OXI_SPO2, ev_o2->Max( ) );
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sess->setMin( POS_Motion, ev_mv->Min( ) );
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sess->setMax( POS_Motion, ev_mv->Max( ) );
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sess->really_set_last( time_ms );
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sess->SetChanged( true );
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mach->AddSession( sess );
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mach->Save( );
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return true;
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}
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static bool viatom_initialized = false;
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void
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ViatomLoader::Register( )
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{
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if (!viatom_initialized) {
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qDebug( "Registering ViatomLoader" );
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RegisterLoader( new ViatomLoader( ) );
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//InitModelMap();
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viatom_initialized = true;
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}
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}
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47
oscar/SleepLib/loader_plugins/viatom_loader.h
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47
oscar/SleepLib/loader_plugins/viatom_loader.h
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@ -0,0 +1,47 @@
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/* SleepLib Viatom Loader Header
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*
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* Copyright (c) 2019 The OSCAR Team (written by dave madden <dhm@mersenne.com>)
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*
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* This file is subject to the terms and conditions of the GNU General Public
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* License. See the file COPYING in the main directory of the source code
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* for more details. */
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#ifndef VIATOMLOADER_H
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#define VIATOMLOADER_H
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#include "SleepLib/machine_loader.h"
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const QString viatom_class_name = "Viatom";
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const int viatom_data_version = 1;
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/*! \class ViatomLoader
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\brief Unfinished stub for loading Viatom Sleep Ring / Wrist Pulse Oximeter data
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*/
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class ViatomLoader : public MachineLoader
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{
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public:
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ViatomLoader() { m_type = MT_MULTI; }
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virtual ~ViatomLoader() { }
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virtual bool Detect(const QString & path);
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virtual int Open(const QString & path);
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virtual int OpenFile(const QString & filename);
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static void Register();
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virtual int Version() { return viatom_data_version; }
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virtual const QString &loaderName() { return viatom_class_name; }
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virtual MachineInfo newInfo() {
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return MachineInfo(MT_POSITION, 0, viatom_class_name, QObject::tr("Viatom"), QString(), QString(), QString(), QObject::tr("Viatom Software"), QDateTime::currentDateTime(), viatom_data_version);
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}
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//Machine *CreateMachine();
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protected:
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private:
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};
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#endif // VIATOMLOADER_H
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@ -48,4 +48,4 @@ ChannelID ZEO_SleepStage, ZEO_ZQ, ZEO_TotalZ, ZEO_TimeToZ, ZEO_TimeInWake, ZEO_T
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ZEO_FirstAlarmRing, ZEO_LastAlarmRing, ZEO_FirstSnoozeTime, ZEO_LastSnoozeTime, ZEO_SetAlarmTime,
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ZEO_RiseTime;
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ChannelID POS_Orientation, POS_Inclination;
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ChannelID POS_Orientation, POS_Inclination, POS_Motion;
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@ -50,7 +50,7 @@ enum SummaryType { ST_CNT, ST_SUM, ST_AVG, ST_WAVG, ST_PERC, ST_90P, ST_MIN, ST_
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\brief Generalized type of a machine. MT_CPAP is any type of xPAP machine, MT_OXIMETER any type of Oximeter
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\brief MT_SLEEPSTAGE stage of sleep detector (ZEO importer), MT_JOURNAL for optional notes, MT_POSITION for sleep position detector (Somnopose)
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*/
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enum MachineType { MT_UNKNOWN = 0, MT_CPAP, MT_OXIMETER, MT_SLEEPSTAGE, MT_JOURNAL, MT_POSITION, MT_UNCATEGORIZED = 99};
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enum MachineType { MT_UNKNOWN = 0, MT_CPAP, MT_OXIMETER, MT_SLEEPSTAGE, MT_JOURNAL, MT_POSITION, MT_MULTI, MT_UNCATEGORIZED = 99};
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//void InitMapsWithoutAwesomeInitializerLists();
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/***** NEVER USED --- 8/2019
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@ -161,7 +161,7 @@ extern ChannelID ZEO_SleepStage, ZEO_ZQ, ZEO_TotalZ, ZEO_TimeToZ, ZEO_TimeInWake
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ZEO_FirstAlarmRing, ZEO_LastAlarmRing, ZEO_FirstSnoozeTime, ZEO_LastSnoozeTime, ZEO_SetAlarmTime,
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ZEO_RiseTime;
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extern ChannelID POS_Orientation, POS_Inclination;
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extern ChannelID POS_Orientation, POS_Inclination, POS_Motion;
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const QString GRP_CPAP = "CPAP";
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const QString GRP_POS = "POS";
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@ -276,6 +276,9 @@ void init()
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schema::channel.add(GRP_POS, new Channel(POS_Inclination = 0x2991, WAVEFORM, MT_POSITION, SESSION, STR_GRAPH_Inclination,
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QObject::tr("Inclination"), QObject::tr("Upright angle in degrees"), QObject::tr("Inclination"), STR_UNIT_Degrees, DEFAULT, QColor("dark magenta")));
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schema::channel.add(GRP_POS, new Channel(POS_Motion = 0x2992, WAVEFORM, MT_POSITION, SESSION, STR_GRAPH_Motion,
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QObject::tr("Motion"), QObject::tr("Movement detector"), QObject::tr("Movement"), STR_UNIT_Unknown, DEFAULT, QColor("dark green")));
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schema::channel.add(GRP_CPAP, new Channel(RMS9_MaskOnTime = 0x1025, DATA, MT_CPAP, SESSION, "MaskOnTime",
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QObject::tr("Mask On Time"), QObject::tr("Time started according to str.edf"), QObject::tr("Mask On Time"), STR_UNIT_Unknown, DEFAULT, Qt::black));
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@ -31,6 +31,7 @@ const QString STR_GRAPH_Te = "Te";
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const QString STR_GRAPH_SleepStage = "SleepStage";
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const QString STR_GRAPH_Inclination = "Inclination";
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const QString STR_GRAPH_Orientation = "Orientation";
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const QString STR_GRAPH_Motion = "Motion";
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const QString STR_GRAPH_TestChan1 = "TestChan1";
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const QString STR_GRAPH_TestChan2 = "TestChan2";
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const QString STR_GRAPH_AHI = "AHI";
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@ -79,7 +79,7 @@ inline QString channelInfo(ChannelID code) {
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const QList<QString> standardGraphOrder = {STR_GRAPH_SleepFlags, STR_GRAPH_FlowRate, STR_GRAPH_Pressure, STR_GRAPH_LeakRate, STR_GRAPH_FlowLimitation,
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STR_GRAPH_Snore, STR_GRAPH_TidalVolume, STR_GRAPH_MaskPressure, STR_GRAPH_RespRate, STR_GRAPH_MinuteVent,
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STR_GRAPH_PTB, STR_GRAPH_RespEvent, STR_GRAPH_Ti, STR_GRAPH_Te,
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STR_GRAPH_SleepStage, STR_GRAPH_Inclination, STR_GRAPH_Orientation, STR_GRAPH_TestChan1,
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STR_GRAPH_SleepStage, STR_GRAPH_Inclination, STR_GRAPH_Orientation, STR_GRAPH_Motion, STR_GRAPH_TestChan1,
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STR_GRAPH_Oxi_Pulse, STR_GRAPH_Oxi_SPO2, STR_GRAPH_Oxi_Perf, STR_GRAPH_Oxi_Plethy,
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STR_GRAPH_AHI, STR_GRAPH_TAP
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};
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@ -88,7 +88,7 @@ const QList<QString> standardGraphOrder = {STR_GRAPH_SleepFlags, STR_GRAPH_FlowR
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const QList<QString> advancedGraphOrder = {STR_GRAPH_SleepFlags, STR_GRAPH_FlowRate, STR_GRAPH_MaskPressure, STR_GRAPH_TidalVolume, STR_GRAPH_MinuteVent,
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STR_GRAPH_Ti, STR_GRAPH_Te, STR_GRAPH_FlowLimitation, STR_GRAPH_Pressure, STR_GRAPH_LeakRate, STR_GRAPH_Snore,
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STR_GRAPH_RespRate, STR_GRAPH_PTB, STR_GRAPH_RespEvent,
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STR_GRAPH_SleepStage, STR_GRAPH_Inclination, STR_GRAPH_Orientation, STR_GRAPH_TestChan1,
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STR_GRAPH_SleepStage, STR_GRAPH_Inclination, STR_GRAPH_Orientation, STR_GRAPH_Motion, STR_GRAPH_TestChan1,
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STR_GRAPH_Oxi_Pulse, STR_GRAPH_Oxi_SPO2, STR_GRAPH_Oxi_Perf, STR_GRAPH_Oxi_Plethy,
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STR_GRAPH_AHI, STR_GRAPH_TAP
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};
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@ -239,7 +239,7 @@ Daily::Daily(QWidget *parent,gGraphView * shared)
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const ChannelID cpapcodes[] = {
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CPAP_FlowRate, CPAP_Pressure, CPAP_Leak, CPAP_FLG, CPAP_Snore, CPAP_TidalVolume,
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CPAP_MaskPressure, CPAP_RespRate, CPAP_MinuteVent, CPAP_PTB, CPAP_RespEvent, CPAP_Ti, CPAP_Te,
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/* CPAP_IE, */ ZEO_SleepStage, POS_Inclination, POS_Orientation, CPAP_Test1
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/* CPAP_IE, */ ZEO_SleepStage, POS_Inclination, POS_Orientation, POS_Motion, CPAP_Test1
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};
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// Create graphs from the cpap code list
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@ -400,6 +400,7 @@ Daily::Daily(QWidget *parent,gGraphView * shared)
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graphlist[schema::channel[POS_Inclination].code()]->AddLayer(new gLineChart(POS_Inclination));
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graphlist[schema::channel[POS_Orientation].code()]->AddLayer(new gLineChart(POS_Orientation));
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graphlist[schema::channel[POS_Motion].code()]->AddLayer(new gLineChart(POS_Motion));
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graphlist[schema::channel[CPAP_MinuteVent].code()]->AddLayer(lc=new gLineChart(CPAP_MinuteVent, square));
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lc->addPlot(CPAP_TgMV, square);
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@ -1281,7 +1282,7 @@ QString Daily::getStatisticsInfo(Day * day)
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CPAP_Pressure,CPAP_EPAP,CPAP_IPAP,CPAP_PS,CPAP_PTB,
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CPAP_MinuteVent, CPAP_RespRate, CPAP_RespEvent,CPAP_FLG,
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CPAP_Leak, CPAP_LeakTotal, CPAP_Snore, /* CPAP_IE, */ CPAP_Ti,CPAP_Te, CPAP_TgMV,
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CPAP_TidalVolume, OXI_Pulse, OXI_SPO2, POS_Inclination, POS_Orientation
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CPAP_TidalVolume, OXI_Pulse, OXI_SPO2, POS_Inclination, POS_Orientation, POS_Motion
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};
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int numchans=sizeof(chans)/sizeof(ChannelID);
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int ccnt=0;
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@ -43,6 +43,7 @@
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#include "SleepLib/loader_plugins/intellipap_loader.h"
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#include "SleepLib/loader_plugins/icon_loader.h"
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#include "SleepLib/loader_plugins/weinmann_loader.h"
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#include "SleepLib/loader_plugins/viatom_loader.h"
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MainWindow *mainwin = nullptr;
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@ -583,6 +584,7 @@ int main(int argc, char *argv[]) {
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CMS50Loader::Register();
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CMS50F37Loader::Register();
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MD300W1Loader::Register();
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ViatomLoader::Register();
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schema::setOrders(); // could be called in init...
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@ -40,6 +40,7 @@
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// Custom loaders that don't autoscan..
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#include <SleepLib/loader_plugins/zeo_loader.h>
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#include <SleepLib/loader_plugins/somnopose_loader.h>
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#include <SleepLib/loader_plugins/viatom_loader.h>
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#ifdef REMSTAR_M_SUPPORT
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#include <SleepLib/loader_plugins/mseries_loader.h>
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@ -2396,6 +2397,30 @@ void MainWindow::on_actionImport_Somnopose_Data_triggered()
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}
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void MainWindow::on_actionImport_Viatom_Data_triggered()
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{
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QFileDialog w;
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w.setFileMode(QFileDialog::ExistingFiles);
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w.setWindowFlags(this->windowFlags() & ~Qt::WindowContextHelpButtonHint);
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w.setOption(QFileDialog::ShowDirsOnly, false);
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w.setOption(QFileDialog::DontUseNativeDialog, true);
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w.setNameFilters(QStringList("Viatom Data File (20[0-5][0-9][01][0-9][0-3][0-9][012][0-9][0-5][0-9][0-5][0-9])"));
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ViatomLoader viatom;
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if (w.exec() == QFileDialog::Accepted) {
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QString filename = w.selectedFiles()[0];
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if (!viatom.OpenFile(filename)) {
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Notify(tr("There was a problem opening Viatom data file: ") + filename);
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return;
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}
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Notify(tr("Viatom Data Import complete"));
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daily->LoadDate(daily->getDate());
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}
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}
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void MainWindow::GenerateStatistics()
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{
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QDate first = p_profile->FirstDay();
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@ -295,6 +295,8 @@ class MainWindow : public QMainWindow
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void on_actionImport_Somnopose_Data_triggered();
|
||||
|
||||
void on_actionImport_Viatom_Data_triggered();
|
||||
|
||||
//! \brief Populates the statistics with information.
|
||||
void on_statisticsButton_clicked();
|
||||
|
||||
|
||||
@ -2905,6 +2905,7 @@ p, li { white-space: pre-wrap; }
|
||||
<addaction name="separator"/>
|
||||
<addaction name="actionImport_ZEO_Data"/>
|
||||
<addaction name="actionImport_Somnopose_Data"/>
|
||||
<addaction name="actionImport_Viatom_Data"/>
|
||||
<addaction name="actionImport_RemStar_MSeries_Data"/>
|
||||
<addaction name="separator"/>
|
||||
<addaction name="action_Rebuild_Oximetry_Index"/>
|
||||
@ -3136,6 +3137,11 @@ p, li { white-space: pre-wrap; }
|
||||
<string>Import &Somnopose Data</string>
|
||||
</property>
|
||||
</action>
|
||||
<action name="actionImport_Viatom_Data">
|
||||
<property name="text">
|
||||
<string>Import &Viatom Data</string>
|
||||
</property>
|
||||
</action>
|
||||
<action name="actionPurgeCurrentDaysOximetry">
|
||||
<property name="text">
|
||||
<string>Current Days</string>
|
||||
|
||||
@ -292,6 +292,7 @@ SOURCES += \
|
||||
SleepLib/loader_plugins/prs1_loader.cpp \
|
||||
SleepLib/loader_plugins/resmed_loader.cpp \
|
||||
SleepLib/loader_plugins/somnopose_loader.cpp \
|
||||
SleepLib/loader_plugins/viatom_loader.cpp \
|
||||
SleepLib/loader_plugins/zeo_loader.cpp \
|
||||
zip.cpp \
|
||||
miniz.c \
|
||||
@ -366,6 +367,7 @@ HEADERS += \
|
||||
SleepLib/loader_plugins/prs1_loader.h \
|
||||
SleepLib/loader_plugins/resmed_loader.h \
|
||||
SleepLib/loader_plugins/somnopose_loader.h \
|
||||
SleepLib/loader_plugins/viatom_loader.h \
|
||||
SleepLib/loader_plugins/zeo_loader.h \
|
||||
zip.h \
|
||||
miniz.h \
|
||||
|
||||
@ -41,8 +41,9 @@ void Welcome::refreshPage()
|
||||
QList<Machine *> oximachines = p_profile->GetMachines(MT_OXIMETER);
|
||||
QList<Machine *> posmachines = p_profile->GetMachines(MT_POSITION);
|
||||
QList<Machine *> stgmachines = p_profile->GetMachines(MT_SLEEPSTAGE);
|
||||
QList<Machine *> mltmachines = p_profile->GetMachines(MT_MULTI);
|
||||
|
||||
bool noMachines = mlist.isEmpty() && posmachines.isEmpty() && oximachines.isEmpty() && stgmachines.isEmpty();
|
||||
bool noMachines = mlist.isEmpty() && posmachines.isEmpty() && oximachines.isEmpty() && stgmachines.isEmpty() && mltmachines.isEmpty();
|
||||
|
||||
bool showCardWarning = noMachines;
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user