More unfinished ResMed stuff

Graphs/graphwindow.cpp

@@ -693,8 +693,8 @@ void gGraphWindow::Render(float w, float h)
         glEnd();
     } else {
 
-        glClearColor(255,255,255,255);
+        glClearColor(255,255,255,0);
-        glClear(GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT);
+        glClear(GL_COLOR_BUFFER_BIT ); //| GL_DEPTH_BUFFER_BIT
     //    glClear(GL_COLOR_BUFFER_BIT);
     }
 

SleepLib/loader_plugins/resmed_loader.cpp

@@ -16,6 +16,120 @@ License: GPL
 #include "resmed_loader.h"
 #include "SleepLib/session.h"
 
+EDFParser::EDFParser(QString name)
+{
+    buffer=NULL;
+    Open(name);
+}
+EDFParser::~EDFParser()
+{
+    vector<EDFSignal *>::iterator s;
+    for (s=edfsignals.begin();s!=edfsignals.end();s++) {
+        if ((*s)->data) delete [] (*s)->data;
+        if ((*s)->adata) delete [] (*s)->adata;
+        delete *s;
+    }
+    if (buffer) delete [] buffer;
+}
+QString EDFParser::Read(int si)
+{
+    QString str;
+    if (pos>=filesize) return "";
+    for (int i=0;i<si;i++) {
+        str+=buffer[pos++];
+    }
+    return str.trimmed();
+}
+bool EDFParser::Parse()
+{
+    bool ok;
+    QString temp,temp2;
+    version=Read(8).toLong(&ok);
+    if (!ok)
+        return false;
+
+    patientident=Read(80);
+    recordingident=Read(80); // Serial number is in here..
+    int snp=recordingident.indexOf("SRN=");
+
+    for (int i=snp+4;i<recordingident.length();i++) {
+        if (recordingident[i]==' ')
+            break;
+        serialnumber+=recordingident[i];
+    }
+    temp=Read(8);
+    temp+=" "+Read(8);
+    startdate.fromString(temp,"dd.MM.yy HH.mm.ss");
+    num_header_bytes=Read(8).toLong(&ok);
+    if (!ok)
+        return false;
+    reserved44=Read(44);
+    num_data_records=Read(8).toLong(&ok);
+    if (!ok)
+        return false;
+    temp=Read(8);
+  //  temp="0.00";
+    dur_data_record=temp.toDouble(&ok);
+    if (!ok)
+        return false;
+    num_signals=Read(4).toLong(&ok);
+    if (!ok)
+        return false;
+
+    for (int i=0;i<num_signals;i++) {
+        EDFSignal *signal=new EDFSignal;
+        edfsignals.push_back(signal);
+        signal->data=NULL;
+        signal->adata=NULL;
+        edfsignals[i]->label=Read(16);
+    }
+
+    for (int i=0;i<num_signals;i++) edfsignals[i]->transducer_type=Read(80);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->physical_dimension=Read(8);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->physical_minimum=Read(8).toLong(&ok);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->physical_maximum=Read(8).toLong(&ok);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->digital_minimum=Read(8).toLong(&ok);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->digital_maximum=Read(8).toLong(&ok);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->prefiltering=Read(80);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->nr=Read(8).toLong(&ok);
+    for (int i=0;i<num_signals;i++) edfsignals[i]->reserved=Read(32);
+
+    for (int i=0;i<num_signals;i++) {
+        //qDebug//cout << "Reading signal " << signals[i]->label << endl;
+        if (edfsignals[i]->label!="EDF Annotations") {
+            // Waveforms
+            edfsignals[i]->data=new qint16 [edfsignals[i]->nr];
+            for (int j=0;j<edfsignals[i]->nr;j++){
+                long t;
+                t=Read(2).toLong(&ok);
+                if (!ok)
+                    return false;
+                edfsignals[i]->data[j]=t & 0xffff;
+            }
+
+        } else { // Annotation data..
+            edfsignals[i]->adata=(char *) new char [edfsignals[i]->nr*2];
+            //cout << signals[i]->nr << endl;;
+            for (int j=0;j<edfsignals[i]->nr*2;j++)
+                edfsignals[i]->adata[j]=buffer[pos++];
+        }
+        //cout << "Read Signal" << endl;
+    }
+    return true;
+}
+bool EDFParser::Open(QString name)
+{
+    QFile f(name);
+    if (!f.open(QIODevice::ReadOnly)) return false;
+    if (!f.isReadable()) return false;
+    filename=name;
+    filesize=f.size();
+    buffer=new char [filesize];
+    f.read(buffer,filesize);
+    f.close();
+    pos=0;
+}
+
 ResmedLoader::ResmedLoader()
 {
 }
@@ -25,12 +139,11 @@ ResmedLoader::~ResmedLoader()
 
 Machine *ResmedLoader::CreateMachine(QString serial,Profile *profile)
 {
-    qDebug(("Create ResMed Machine "+serial).toLatin1());
     assert(profile!=NULL);
     vector<Machine *> ml=profile->GetMachines(MT_CPAP);
     bool found=false;
     for (vector<Machine *>::iterator i=ml.begin(); i!=ml.end(); i++) {
-        if (((*i)->GetClass()=="ResMed") && ((*i)->properties["Serial"]==serial)) {
+        if (((*i)->GetClass()==resmed_class_name) && ((*i)->properties["Serial"]==serial)) {
             ResmedList[serial]=*i; //static_cast<CPAP *>(*i);
             found=true;
             break;
@@ -38,12 +151,15 @@ Machine *ResmedLoader::CreateMachine(QString serial,Profile *profile)
     }
     if (found) return ResmedList[serial];
 
+    qDebug(("Create ResMed Machine %s"+serial).toLatin1());
     Machine *m=new CPAP(profile,0);
+    m->SetClass(resmed_class_name);
 
     ResmedList[serial]=m;
     profile->AddMachine(m);
 
     m->properties["Serial"]=serial;
+    m->properties["Brand"]="ResMed";
 
     return m;
 
@@ -67,20 +183,82 @@ bool ResmedLoader::Open(QString & path,Profile *profile)
         return 0;
 
     qDebug(("ResmedLoader::Open newpath="+newpath).toLatin1());
-    dir.setFilter(QDir::NoDotAndDotDot | QDir::Dirs | QDir::Files | QDir::Hidden | QDir::NoSymLinks);
+    dir.setFilter(QDir::Files | QDir::Hidden | QDir::NoSymLinks);
     dir.setSorting(QDir::Name);
     QFileInfoList flist=dir.entryInfoList();
-
+    map<SessionID,vector<QString> > sessfiles;
-
+    QString ext,rest,datestr,s,codestr;
-    list<QString> SerialNumbers;
+    SessionID sessionid;
-    list<QString>::iterator sn;
+    QDateTime date;
+    map<SessionID,Session *> sessions;
+    Session *sess;
+    Machine *m;
 
     for (int i=0;i<flist.size();i++) {
         QFileInfo fi=flist.at(i);
         QString filename=fi.fileName();
+        ext=filename.section(".",1).toLower();
+        if (ext!="edf") continue;
+        rest=filename.section(".",0,0);
+        datestr=filename.section("_",0,1);
+        date=QDateTime::fromString(datestr,"yyyyMMdd_HHmmss");
+        sessionid=date.toTime_t();
+
+        s.sprintf("%li",sessionid);
+        codestr=rest.section("_",2).toUpper();
+        int code;
+        if (codestr=="EVE") code=0;
+        else if (codestr=="PLD") code=1;
+        else if (codestr=="BRP") code=2;
+        else if (codestr=="SAD") code=3;
+        else {
+            qDebug(("Unknown file EDF type"+filename).toLatin1());
+            continue;
+        }
+        qDebug(("Parsing "+filename).toLatin1());
+        EDFParser edf(fi.canonicalFilePath());
+        if (!edf.Parse()) continue;
+
+        Machine *m=CreateMachine(edf.serialnumber,profile);
+
+        if (sessions.find(sessionid)==sessions.end()) {
+            sessions[sessionid]=new Session(m,sessionid);
+        }
+
+        sess=sessions[sessionid];
+        sess->SetChanged(true);
+        switch(code) {
+        case 0: LoadEVE(m,sess,edf);
+                break;
+        case 1: LoadPLD(m,sess,edf);
+                break;
+        case 2: LoadBRP(m,sess,edf);
+                break;
+        case 3: LoadSAD(m,sess,edf);
+                break;
+        }
     }
     return 0;
 }
+bool ResmedLoader::LoadEVE(Machine *mach,Session *sess,EDFParser &edf)
+{
+    QString t;
+    for (int s=0;s<edf.GetNumSignals();s++) {
+        t.sprintf("%i",edf.edfsignals[s]->nr);
+        qDebug((edf.edfsignals[s]->label+" "+t).toLatin1());
+        if (edf.edfsignals[s]->adata) {
+        }
+    }
+}
+bool ResmedLoader::LoadBRP(Machine *mach,Session *sess,EDFParser &edf)
+{
+}
+bool ResmedLoader::LoadSAD(Machine *mach,Session *sess,EDFParser &edf)
+{
+}
+bool ResmedLoader::LoadPLD(Machine *mach,Session *sess,EDFParser &edf)
+{
+}
 
 void ResInitModelMap()
 {

SleepLib/loader_plugins/resmed_loader.h

@@ -10,6 +10,7 @@ License: GPL
 #define RESMED_LOADER_H
 //#include <map>
 //using namespace std;
+#include <vector>
 #include "SleepLib/machine.h" // Base class: MachineLoader
 #include "SleepLib/machine_loader.h"
 #include "SleepLib/profiles.h"
@@ -25,6 +26,56 @@ const int resmed_data_version=1;
 
 const QString resmed_class_name="ResMed";
 
+struct EDFSignal {
+public:
+    QString label;
+    QString transducer_type;
+    QString physical_dimension;
+    long physical_minimum;
+    long physical_maximum;
+    long digital_minimum;
+    long digital_maximum;
+    QString prefiltering;
+    long nr;
+    QString reserved;
+    qint16 * data;
+    char *adata;
+};
+
+class EDFParser
+{
+public:
+    EDFParser(QString filename);
+    ~EDFParser();
+    bool Open(QString name);
+
+    QString Read(int si);
+
+    vector<EDFSignal *> edfsignals;
+
+    long GetNumSignals() { return num_signals; };
+    long GetNumDataRecords() { return num_data_records; };
+    long GetDuration() { return dur_data_record; };
+    QString GetPatient() { return patientident; };
+    bool Parse();
+    char *buffer;
+    QString filename;
+    int filesize;
+    int pos;
+
+    long version;
+    long num_header_bytes;
+    long num_data_records;
+    double dur_data_record;
+    long num_signals;
+
+    QString patientident;
+    QString recordingident;
+    QString serialnumber;
+    QDateTime startdate;
+    QString reserved44;
+};
+
 class ResmedLoader : public MachineLoader
 {
 public:
@@ -39,6 +90,11 @@ public:
     static void Register();
 protected:
     map<QString,Machine *> ResmedList;
+    bool LoadEVE(Machine *mach,Session *sess,EDFParser &edf);
+    bool LoadBRP(Machine *mach,Session *sess,EDFParser &edf);
+    bool LoadSAD(Machine *mach,Session *sess,EDFParser &edf);
+    bool LoadPLD(Machine *mach,Session *sess,EDFParser &edf);
+
 };
 
 #endif // RESMED_LOADER_H

daily.cpp

@@ -443,7 +443,7 @@ void Daily::Load(QDate date)
         QString submodel=tr("Unknown Model");
 
 
-        html=html+"<tr><td colspan=4 align=center><i>"+tr("Machine Information")+"</i></td></tr>\n";
+        //html=html+"<tr><td colspan=4 align=center><i>"+tr("Machine Information")+"</i></td></tr>\n";
         if (cpap->machine->properties.find("SubModel")!=cpap->machine->properties.end())
             submodel=" <br>"+cpap->machine->properties["SubModel"];
         html=html+"<tr><td colspan=4 align=center><b>"+cpap->machine->properties["Brand"]+"</b> <br>"+cpap->machine->properties["Model"]+" "+cpap->machine->properties["ModelNumber"]+submodel+"</td></tr>\n";
@@ -484,7 +484,7 @@ void Daily::Load(QDate date)
         html=html+("<tr><td colspan=4 align=center><i>")+tr("Event Breakdown")+("</i></td></tr>\n");
         {
             G_AHI->setFixedSize(gwwidth,gwheight);
-            QPixmap pixmap=G_AHI->renderPixmap(200,200,false); //gwwidth,gwheight,false);
+            QPixmap pixmap=G_AHI->renderPixmap(120,120,false); //gwwidth,gwheight,false);
             QByteArray byteArray;
             QBuffer buffer(&byteArray); // use buffer to store pixmap into byteArray
             buffer.open(QIODevice::WriteOnly);
@@ -823,3 +823,50 @@ void Daily::on_JournalNotesUnderline_clicked()
     cursor.mergeCharFormat(format);
    //ui->JournalNotes->mergeCurrentCharFormat(format);
 }
+
+
+
+AHIGraph::AHIGraph(QObject * parent)
+{
+}
+AHIGraph::~AHIGraph()
+{
+}
+QObject * AHIGraph::create(const QString & mimeType, const QUrl & url, const QStringList & argumentNames, const QStringList & argumentValues) const
+{
+    gGraphWindow * ahi;
+    ahi=new gGraphWindow(NULL,"",(QGLWidget *)NULL);
+    ahi->SetMargins(0,0,0,0);
+    gPointData *g_ahi=new AHIData();
+    //gCandleStick *l=new gCandleStick(g_ahi);
+    gPieChart *l=new gPieChart(g_ahi);
+    l->AddName(tr("H"));
+    l->AddName(tr("OA"));
+    l->AddName(tr("CA"));
+    l->AddName(tr("RE"));
+    l->AddName(tr("FL"));
+    l->AddName(tr("CSR"));
+    l->color.clear();
+    l->color.push_back(QColor("blue"));
+    l->color.push_back(QColor(0x40,0xaf,0xbf,0xff)); //#40afbf
+    l->color.push_back(QColor(0xb2,0x54,0xcd,0xff)); //b254cd; //wxPURPLE);
+    l->color.push_back(QColor("yellow"));
+    l->color.push_back(QColor(0x40,0x40,0x40,255));
+    l->color.push_back(QColor(0x60,0xff,0x60,0xff)); //80ff80
+
+    return ahi;
+}
+QList<QWebPluginFactory::Plugin> AHIGraph::plugins() const
+{
+    QWebPluginFactory::MimeType mimeType;
+    mimeType.name = "text/csv";
+    mimeType.description = "Comma-separated values";
+    mimeType.fileExtensions = QStringList() << "csv";
+
+    QWebPluginFactory::Plugin plugin;
+    plugin.name = "Pie Chart";
+    plugin.description = "A Pie Chart Web plugin.";
+    plugin.mimeTypes = QList<MimeType>() << mimeType;
+
+    return QList<QWebPluginFactory::Plugin>() << plugin;
+}

daily.h

@@ -14,6 +14,7 @@
 #include <QTreeWidget>
 #include <QLabel>
 #include <QtOpenGL/QGLContext>
+#include <QWebPluginFactory>
 #include <SleepLib/profiles.h>
 #include <Graphs/graphwindow.h>
 #include <Graphs/graphdata.h>
@@ -82,4 +83,14 @@ private:
     QLabel *NoData;
 };
 
+class AHIGraph:public QWebPluginFactory
+{
+public:
+    AHIGraph(QObject * parent = 0);
+    virtual ~AHIGraph();
+    virtual QObject * 	create ( const QString & mimeType, const QUrl & url, const QStringList & argumentNames, const QStringList & argumentValues) const;
+    virtual QList<Plugin> plugins () const;
+    //virtual void refreshPlugins ();
+};
+
 #endif // DAILY_H

mainwindow.cpp

@@ -77,6 +77,11 @@ MainWindow::~MainWindow()
     delete ui;
     Profiles::Done();
 }
+void MainWindow::showEvent(QShowEvent * event)
+{
+    if (daily)
+        daily->RedrawGraphs();
+}
 
 void MainWindow::Startup()
 {

mainwindow.h

@@ -59,6 +59,7 @@ private slots:
     void on_action_Link_Graphs_triggered(bool checked);
 
     void on_actionUse_AntiAliasing_triggered(bool checked);
+    void showEvent(QShowEvent * event);
 
 private:
     Ui::MainWindow *ui;

mainwindow.ui

@@ -575,6 +575,17 @@
    <addaction name="menu_Help"/>
   </widget>
   <widget class="QStatusBar" name="statusbar"/>
+  <widget class="QToolBar" name="toolBar">
+   <property name="windowTitle">
+    <string>toolBar</string>
+   </property>
+   <attribute name="toolBarArea">
+    <enum>TopToolBarArea</enum>
+   </attribute>
+   <attribute name="toolBarBreak">
+    <bool>false</bool>
+   </attribute>
+  </widget>
   <action name="action_Import_Data">
    <property name="text">
     <string>&amp;Import Data</string>